bsd4me
Well-Known Member
Hallo,
leider habe ich ein Problem mit ncbi blast version 2.7.1 - die gibt es zwar als Binärpaket unter 10.3 - das läuft aber nicht unter da... Und wenn ich es kompiliere stoppt es bei:
...
/bin/ln -f libncbi_xreader_gicache.a /bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/lib/libncbi_xreader_gicache.a
/bin/ln -f .ncbi_xreader_gicache.dep /bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/status/.ncbi_xreader_gicache.dep
gmake[6]: *** No rule to make target '/bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/status/.lmdb.dep', needed by 'libncbi_xreader_gicache-dll.so'. Stop.
gmake[6]: Leaving directory '/bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/build/objtools/data_loaders/genbank/gicache'
FAILED: src/objtools/data_loaders/genbank/gicache/Makefile.ncbi_xreader_gicache.lib
gmake[6]: Entering directory '/bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/build/objtools/data_loaders/genbank/gicache'
/bin/rm -f libncbi_xreader_gicache.a .ncbi_xreader_gicache.dep .libncbi_xreader_gicache.a.stamp
/bin/rm -f /bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/lib/libncbi_xreader_gicache.a /bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/status/.ncbi_xreader_gicache.dep \
/bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/lib/libncbi_xreader_gicache-static.a /bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/status/.ncbi_xreader_gicache-static.dep
/bin/rm -f libncbi_xreader_gicache-dll.so libncbi_xreader_gicache-dll.so .ncbi_xreader_gicache-dll.dep .libncbi_xreader_gicache-dll.so.stamp
/bin/rm -f /bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/lib/libncbi_xreader_gicache-dll.so /bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/status/.ncbi_xreader_gicache-dll.dep
/bin/rm -f /bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/lib/libncbi_xreader_gicache-dll.so /bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/status/.ncbi_xreader_gicache-dll.dep
gmake[6]: Leaving directory '/bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/build/objtools/data_loaders/genbank/gicache'
gmake[5]: *** [/bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/src/build-system/Makefile.meta_l:301: all.nonusr] Error 2
gmake[5]: Leaving directory '/bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/build/objtools/data_loaders/genbank/gicache'
gmake[4]: *** [/bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/src/build-system/Makefile.meta_r:41: all_r.real] Error 5
...
Vielen Dank für Tips! Norbert
leider habe ich ein Problem mit ncbi blast version 2.7.1 - die gibt es zwar als Binärpaket unter 10.3 - das läuft aber nicht unter da... Und wenn ich es kompiliere stoppt es bei:
...
/bin/ln -f libncbi_xreader_gicache.a /bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/lib/libncbi_xreader_gicache.a
/bin/ln -f .ncbi_xreader_gicache.dep /bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/status/.ncbi_xreader_gicache.dep
gmake[6]: *** No rule to make target '/bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/status/.lmdb.dep', needed by 'libncbi_xreader_gicache-dll.so'. Stop.
gmake[6]: Leaving directory '/bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/build/objtools/data_loaders/genbank/gicache'
FAILED: src/objtools/data_loaders/genbank/gicache/Makefile.ncbi_xreader_gicache.lib
gmake[6]: Entering directory '/bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/build/objtools/data_loaders/genbank/gicache'
/bin/rm -f libncbi_xreader_gicache.a .ncbi_xreader_gicache.dep .libncbi_xreader_gicache.a.stamp
/bin/rm -f /bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/lib/libncbi_xreader_gicache.a /bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/status/.ncbi_xreader_gicache.dep \
/bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/lib/libncbi_xreader_gicache-static.a /bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/status/.ncbi_xreader_gicache-static.dep
/bin/rm -f libncbi_xreader_gicache-dll.so libncbi_xreader_gicache-dll.so .ncbi_xreader_gicache-dll.dep .libncbi_xreader_gicache-dll.so.stamp
/bin/rm -f /bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/lib/libncbi_xreader_gicache-dll.so /bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/status/.ncbi_xreader_gicache-dll.dep
/bin/rm -f /bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/lib/libncbi_xreader_gicache-dll.so /bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/status/.ncbi_xreader_gicache-dll.dep
gmake[6]: Leaving directory '/bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/build/objtools/data_loaders/genbank/gicache'
gmake[5]: *** [/bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/src/build-system/Makefile.meta_l:301: all.nonusr] Error 2
gmake[5]: Leaving directory '/bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/ReleaseMT/build/objtools/data_loaders/genbank/gicache'
gmake[4]: *** [/bioappl/src/blast/ncbi-blast-2.7.1+-src/c++/src/build-system/Makefile.meta_r:41: all_r.real] Error 5
...
Vielen Dank für Tips! Norbert